SE2020187

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5389
  • Medicago truncatula
  • SE2020187
  • Mutator
  • M46
  • MtChr8:4629952-4630150
  • TTTTAATTG
  • GGGTTTGTCTAACATGTGCAATATTGCACATGTTAAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
 TTTTAATT      G    A         TA               TAACTA          C   TTA   A  ACCAACAATTATTG      AACT
         GGGTTT TCTA CATGTGCAA  TTGCACATGTTAAGG      AAAGTAGTAA TTT   TTG AA              ATTAAA    
         |||||| |||| |||||||||  |||||||||||||||      |||||||||| |||   ||| ||              ||||||    A
         CCCAAA AGAT GTACACGTT  AACGTGTATAATTCT      TTTCATCATT AAA   AAC TT              TAATTT    
TTAATTTTT      A    A         TA               -TCAAA          A   TTG   C  GAACACAAAAAATA      ATAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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