SE2020188

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5390
  • Medicago truncatula
  • SE2020188
  • Mutator
  • M46
  • MtChr7:21603772-21603971
  • TTGAAAAAA
  • AAGGGTTTATCTAACATGTGCAATATTGCACATGTTAAGGAAACTAAATGTAGCAACTTTGCATTGGAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTGAAAA        A    A         TA                 AC    T  A    C    CA      -AACACCAATTAT       A  TT
       AAGGGTTT TCTA CATGTGCAA  TTGCACATGTTAAGGAA  TAAA GT GCAA TTTG  TTGGAA             TATTAAA AG  
       |||||||| |||| |||||||||  |||||||||||||||||  |||| || |||| ||||  ||||||             ||||||| ||   
       TTCCCAAA AGAT GTACACGTT  AACGTGTACAATTCTTT  ATTT CA CGTT AAAT  AACTTT             ATAATTT TC  
AAAAAAG        A    A         TA                 AA    -  C    C    AG      GAACATATAAGAT       A  TA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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