SE2020197

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5399
  • Medicago truncatula
  • SE2020197
  • Mutator
  • M7
  • MtChr8:4154027-4154219
  • ATAAACAAA
  • GGGTCTTGTTAACAAGTGTTCTAAGAGCATTATTTAAG

Secondary structure and sequence

TSD    TIR
5'



3' 
ATAAACAAA   TCT                A    C   A      AAA   ACTAAAAGAAAGTTTGTCCATAAAATACAAGTCAAACATATATA
         GGG   TGTTAACAAGTGTTCT AGAG ATT TTTAAG   TCT                                            
         |||   |||||||||||||||| |||| ||| ||||||   |||                                             
         CTT   ACGATTGTTCATAGGG TCTC TAA AAATTC   AGG                                            
AAACAAATA   TTT                A    A   C      -AT   TTTTAATCATCAAAAATAGAACCTTTAACATATTAATAATGAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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