SE2030218

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5420
  • Medicago truncatula
  • SE2030218
  • hAT
  • Hat2
  • MtChr2:24250291-24250476
  • GTTGTAAT
  • GTTGTAATCTATGAAGCACGGATAC

Secondary structure and sequence

TSD    TIR
5'



3' 
                         G   ACCGGACACTGACACGCCGACATGGCAAATAATTTGAAAAAATCACAAAATTCAGTGTAATTAC
GTTGTAATCTATGAAGCACGGATAC GAC                                                                
||||||||||||||||||||||||| |||                                                                 
TAATGTTGGATACTTCGTGCCTGTG GGA                                                                
                         A   GCCTAATCCGCACAGGGCCACAGCCTGTGCGTAGCACAGGCTGTGGCTGTGCTGTGGCCGTGAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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