SE2030243

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5445
  • Medicago truncatula
  • SE2030243
  • hAT
  • Hat19
  • MtChr5:21472675-21472856
  • CTTCAATC
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
CTTCAATCTAGTG               TATT --C   GTGAAATTTGATAAAATCACTATTGTTCCGTGATATGCTATTTAGTAAAAAATGTTG
             TTATTAAATAGCGGC    C   GTA                                                         
             |||||||||||||||    |   |||                                                          
             TTACAACAGTTAACG    T   GTG                                                         
    CTAACTTCG               ---- ATA   TCTTTTATCGCCCAACAATGTTAAGTCGATGTGTTGTTACGATATCGGCAATAAACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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