SE2020256

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5458
  • Medicago truncatula
  • SE2020256
  • Mutator
  • M28
  • AC229699:14984-15359
  • AAAATAAAA
  • GGCTTAATTGCACTTTTCCCCCCTATCTTTTGCTAATTGTGCGATTTTGCACCCCCTCTTTTTTTTTGAGC

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAATAAAA                                                                       AATTTT   CCTCATCTTTTTGCCCCCTTTATGATTTTGCACCCCATCTTTGTGTTCAATTGCACTTTTGCCCCTTATCTTTTTGCTAATTGTGCGATTTTGCACCTTCTC
         GGCTTAATTGCACTTTTCCCCCCTATCTTTTGCTAATTGTGCGATTTTGCACCCCCTCTTTTTTTTTGAGC      GCA                                                                                                      
         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |||                                                                                                       
         CCGAATTAACGTGAAAAGGGGGGATAGAAAACGATTAACACGCTAAAACGTGGGGGAGAAAAAAAAACTCG      CTA                                                                                                      
AAAATAAAA                                                                       ------   AAACGTGAGGTAGAAAACAGTTAACACAAAACAAGTTTTAGTAGTAATTTTCTCTCCTTTTCCCCGATTTCTATCCCACGTTTTAGCGAGTTTTTTTTTCTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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