SE2040260

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5462
  • Medicago truncatula
  • SE2040260
  • CACTA
  • Ca1
  • MtChr8:22596359-22596513
  • GAT
  • CACTACTAAAAAAACAAAAATTAGTGAGAGAAATTTAGTGAGGGAAAATGTAAAATCCTT

Secondary structure and sequence

TSD    TIR
5'



3' 
GAT        A     CA            A      T     G      T       -    CTCTAATTC    A TAAA
   CACTACTA AAAAA  AAAATTAGTGAG GAAATT AGTGA GGAAAA GTAAAAT CCTT         TGTC C    
   |||||||| |||||  |||||||||||| |||||| ||||| |||||| ||||||| ||||         |||| |     
   GTGATGAT TTTTT  TTTTAATCGCTC CTTTAG TTACT CTTTTT TATTTTA GGAA         ACAG G    
TAG        C     CG            C      -     G      T       A    ---------    C TTTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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