SE2020264

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5466
  • Medicago truncatula
  • SE2020264
  • Mutator
  • M46
  • MtChr2:11679172-11679371
  • TTTTTTTAA
  • AAGGGTTTTTCTATCATGTGCAAATTTGCACATGTTAAG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTTTTT        T    T         AT              -AAGTTT          C   AAC     A       TTTTTATATTAAATATGT
       AAGGGTTT TCTA CATGTGCAA  TTGCACATGTTAAG       AAAGTAGTAA TTT   TTGAA CTTGTGT                  
       |||||||| |||| |||||||||  ||||||||||||||       |||||||||| |||   ||||| |||||||                   
       TTCCCAAA AGAT GTACACGTT  AACGTGTACAATTC       TTTCATCATT AAA   AACTT TTGGTTG                  
AATTTTT        C    T         AT              CATTGAT          A   AGT     -       TTAATAACTAATTTTCGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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