SE2010269

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5471
  • Medicago truncatula
  • SE2010269
  • Tc1/Mariner
  • St24
  • MtChr5:34712259-34712541
  • TA
  • TACTCCCTCCGTCCCAAATTGTATGACGTTTTGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
                         A         ----CA     CACATATTAAGAAATGTAATTAATATTGTGTGGGAAAGAGATATTATGAGTTGTTTTACAAAATTGTCCTCAATAAATGATATGGAAAAGATAAATG
TACTCCCTCCGTCCCAAATTGTATG CGTTTTGGG      TTTCA                                                                                                 
||||||||||||||||||||||||| |||||||||      |||||                                                                                                 A
ATGAGGGAGGCAGGGTTTAACATAC GTAAAATCT      TAAAC                                                                                                 
                         A         TTTTTA     AGGGTTTAACATACAGCGAAATGTTATAGTTACTTTTTAATTACAATGAAAAGGATAATATAGGAATTGATAAATAATGAGAGAAGAAAGTTAAGTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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