SE2030271

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5473
  • Medicago truncatula
  • SE2030271
  • hAT
  • Hat22
  • MtChr8:30117003-30117381
  • TAAACAAC
  • CAGTGGCGGATCTTAGTA

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAACAAC              -    ----------C       T      CATGGCATCCCCTGGGTTTTTAATATATACCATATTATGCATAATATTTCAGCAAGTTTTCATTCGTCGCAGCGGTAAGCTAGTCGTATGGTCCCCCCCAGCGGTCGCGAGTTCAACACTCGCGCCATCTTTTTTGACATTTT
        CAGTGGCGGATCTT AGTA           AGACCCA GGGTGC                                                                                                                                               
        |||||||||||||| ||||           ||||||| ||||||                                                                                                                                               T
        GTCACCGCCTAGAA TCAT           CCACGGT TTGGTG                                                                                                                                               
CAACAAAT              C    TTAAATAATCC       -      GTACTTTATATACATTTAGTCAAAGTTCTTTATCTATTTTATTAGTGGACGGCATCACCAAATATAACAAACTTTCGTGGTTCGCCTACGTCCAAGCTTAGAGACGATCGCCAAAAAAACTTATTTTTTACATTTAAGCTCTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3