SE2020272

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5474
  • Medicago truncatula
  • SE2020272
  • Mutator
  • M2
  • MtChr8:7490035-7490236
  • TTTTTGAAA
  • TTTTGAAAAGAGAAATGATATTTGTACAACCATTTAGTG

Secondary structure and sequence

TSD    TIR
5'



3' 
T    G       A           T          A   ACAA     A           C   CATACTCACAT  TATTCTTACTCTCTCTCTTCCTTTTTCT
 TTTT AAAAGAG AATGATATTTG ACAACCATTT GTG    CTTTT GACAACTTTCT TCT           TA                            
 |||| ||||||| ||||||||||| |||||||||| |||    ||||| ||||||||||| |||           ||                            C
 AAAA TTTTCTC TTACTATAAAC TGTTGGTAAA CAT    GAAAA CTGTTGGAAGA AGA           AG                            
     G       G           T          C   ATTG     A           -   ---------AC  AGAAGAGTAACCAGTTTTTGTTACCTCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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