SE2020273

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5475
  • Medicago truncatula
  • SE2020273
  • Mutator
  • M2
  • MtChr5:9497984-9498184
  • AATCGAAAA
  • TCGAAAAGAGTAATGATATTTGTACAACCACTTTGTGCCAACTTTTAGGCAACTTTC

Secondary structure and sequence

TSD    TIR
5'



3' 
 AA    AAA               T       C  T    C     -TTA          TCTCTCATACTCACAT  TATTCTTACCCTCTCTCTTCCTTTTTCTCTC
   TCGA   GAGTAATGATATTTG ACAACCA TT GTGC AACTT    GGCAACTTTC                TA                               
   ||||   ||||||||||||||| ||||||| || |||| |||||    ||||||||||                ||                                
   AGCT   CTCGTTACTATAAAC TGTTGGT AA CATG TTGGA    CTGTTGGAAG                AA                               
AAA    -AA               T       A  C    -     TAAA          ---------------T  AAGAGAGAAAAGTAACCAGTTTTTGTTACCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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