SE2010274

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5476
  • Medicago truncatula
  • SE2010274
  • Tc1/Mariner
  • St25
  • MtChr2:3694443-3694720
  • TA
  • GTTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TACTCCCTCC     TATATATAA   AATTTTCAAAAAAATCTTTGGTCCAAATTATAAGAAAATATCACAACTTTTAAGGTGTAGTTATTGCCTAAAAGACTTTTCTACCCCTTATTTAATGTTTTTGTTTTTAATATTAATAGGT
          GTTCC         GAA                                                                                                                         
          |||||         |||                                                                                                                          
          TAAGG         GAA                                                                                                                         
         A     ---------   GCCAGGAATAATATTCTTCTTTTTGGTTTTTTGTAGTTTTAGTTACGTTGATAATTAATCATATTGAAAAACTTATAAAAATGTTTATATGGGAATATTTTTCAACACTTCGGAATTTATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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