SE2020278

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5480
  • Medicago truncatula
  • SE2020278
  • Mutator
  • M2
  • MtChr1:8155853-8156053
  • AAAATATAA
  • GAGAAATGATATTTGAACATCCATTTTATGACAACTTTTGTGACAAC

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAATATAA   AAA  A          T C    -TA                   TTTCTCTCTCATACTCACATTACTTTTTACTTTATCTCTCTAT   TT ----  TTTTCGTGCACATA
         GAG   TG TATTTGAACA C ATTT   TGACAACTTTTGTGACAAC                                           TGC  T    GA              
         |||   || |||||||||| | ||||   |||||||||||||||||||                                           |||  |    ||               
         CTC   AC ATAAACTTGT G TAAA   ACTGTTGAAAACACTGTTG                                           GTA  T    TG              
 ATATAAAA   CTC  A          T A    CCA                   -------------------------------------------   -- TAAA  TTTCTTTTTCAACC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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