SE2020297

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5499
  • Medicago truncatula
  • SE2020297
  • Mutator
  • M23
  • MtChr3:31160276-31160454
  • GTACCCATC
  • GTAC

Secondary structure and sequence

TSD    TIR
5'



3' 
          CCATCT  AA                                                                     TTTCTT
      GTAC      GG  AATACTTGGGTGACATAGAGTTGGGTGACATTGGTGACATTGGCCAATCACAATGCCACAATGTTTGTG      
      ||||      ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      T
      CATG      CC  TTGTGAACCCACTGTATCTCAACTCACTGTAACCACTGTAACCGGTTAGTGTTACGGTGTTACGAACAC      
TCTACC    ------  CA                                                                     TTTCTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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