SE2010299

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5501
  • Medicago truncatula
  • SE2010299
  • Tc1/Mariner
  • St10
  • MtChr7:8134657-8134810
  • N.A.
  • CTCCCTCTGGTCGGTCACTATTATAAACAAAAGTTCACTTTTTAGATTCATTCAATAAATGATGTATGTAGTCTA

Secondary structure and sequence

TSD    TIR
5'



3' 
TA   C    GG                AC       CAC       A        A     G        AGT   TA
  CTC CTCT  TCGGTCACTATTATAA  AAAAGTT   TTTTTAG TTCATTCA TAAAT ATGTATGT   CTA  
  ||| ||||  ||||||||||||||||  |||||||   ||||||| |||||||| ||||| ||||||||   |||   
  GAG GAGA  GGCCAGTGATAATATT  TTTTCAA   AAAAATC AAGTAAGT ATTTA TACATACA   GAT  
     A    --                CA       CTA       C        A     A        CTT   AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3