SE2020300

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5502
  • Medicago truncatula
  • SE2020300
  • Mutator
  • M2
  • MtChr4:6943255-6943456
  • AAAAGAAAA
  • GAGGAGTGTTATTTGAACAACCAATTTGGTGACAACTTATTTGACA

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAAGAAAA       GT          A   A              ATT     --------------     A  TTACAAAGAAAAAAATGGTATTGGCACGAAAA
         GAGGAGT  TATTTGAACA CCA TTTGGTGACAACTT   TGACA              ACCAT TT                                
         |||||||  |||||||||| ||| ||||||||||||||   |||||              ||||| ||                                 
         CTCTTTA  ATAAACTTGT GGT AAATTACTGTTGAA   GTTGT              TTAGT GT                                
AAAAGAAAA       AT          A   -              AAC     TAAAAGAGAGAGTA     -  AATAAAAAATGAAATAGAGAGATAACGATACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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