SE2020303

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5505
  • Medicago truncatula
  • SE2020303
  • Mutator
  • M18
  • MtChr4:30412792-30413001
  • TTAACTCTA
  • GAGTAATGCTGGCAACACTCTCTTCTGAACACAATCTCTAATACTCACTCTTTTATTGG

Secondary structure and sequence

TSD    TIR
5'



3' 
 TTAACTCTAT   T    C        C  T   C G  C  AA      A                  TTTAAAC  T    A    --A       AAAATTG
           GAG AATG TGGCAACA TC CTT T AA AC  TCTCTA TACTCACTCTTTTATTGG       CA TGTG GTCC   CACTTTG       
           ||| |||| |||||||| || ||| | || ||  |||||| ||||||||||||||||||       || |||| ||||   |||||||       A
           CTC TTAC ATCGTTGT AG GAA A TT TG  AGAGAT GTGAGTGAGAAGATAACC       GT ACAT TAGG   GTGAAAC       
ATATCCCAATT   C    C        A  T   A G  T  AG      C                  TACTCTA  T    A    GTG       ACACACA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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