SE2020307

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5509
  • Medicago truncatula
  • SE2020307
  • Mutator
  • M2
  • MtChr1:30515048-30515250
  • TTTCTTAAA
  • AAAGAGAAATGATATTTGAACAACCATTTTTTGACAACTTTTGTGACAACT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTCTT      A    A    T A          --TT         -   T       TTCTCTC    ACTCACATGATTATTCTACTTTCTCTTTCTATT
      AAAGAG AATG TATT G ACAACCATTT    TGACAACTT TTG GACAACT       TCAT                                 
      |||||| |||| |||| | ||||||||||    ||||||||| ||| |||||||       ||||                                 G
      TTTCTC TTAC ATAA C TGTTGGTAAA    ACTGTTGAA AAC CTGTTGG       AATG                                 
AAATTC      G    A    C A          TAAC         C   -       --TTTAA    TTTCTTTAAATCTATTACCGTGTTTTTAGTTTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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