SE2020312

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5514
  • Medicago truncatula
  • SE2020312
  • Mutator
  • M10
  • MtChr2:19795597-19795818
  • GCAAAACAA
  • GGGTGAAGATCCTCTCCATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
GCAAAACAA                     ATG      TCCATTTCTTCAATTTGGAGAGATAAAGACACATAAAATCTTTTAAAAAAGTAAAATATAATTAATGATGGTG
         GGGTGAAGATCCTCTCCATTT   TGTTTC                                                                         
         |||||||||||||||||||||   ||||||                                                                          
         CCCACTTCTAGGAGAGGTAAA   CGTTTT                                                                         
AACAAAACG                     --C      ATTTACCTCAAAACGTTCAACTTCTCTCTATCTGTGTTTTTTATCTACCACCCAGGATGGTGATTCACCCAGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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