SE2010313

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5515
  • Medicago truncatula
  • SE2010313
  • Tc1/Mariner
  • St1
  • MtChr5:924756-924905
  • TA
  • TACTCCCTCCGGTCACTATTATAAGCAAAAGTTTATTTTTTAGATTCATTTAATAAATAATGTATGTAGTCTA

Secondary structure and sequence

TSD    TIR
5'



3' 
    C                    C       T                        A        A     TA
TACT CCTCCGGTCACTATTATAAG AAAAGTT ATTTTTTAGATTCATTTAATAAAT ATGTATGT GTCTA  
|||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||| |||||   
ATGA GGAGGTTAGTGATAATATTC TTTTCAA TGAAAAATCTAAGTAAGTTATTTA TACATACA CAGAT  
    A                    A       C                        C        C     AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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