SE2030317

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5519
  • Medicago truncatula
  • SE2030317
  • hAT
  • Hat2
  • MtChr6:4465364-4465566
  • ATGAAAAC
  • CTATGAAGCACGGATACT

Secondary structure and sequence

TSD    TIR
5'



3' 
ATGAAAAC             A    GACA    CACCG  CACGACACGGACACTAACACGCCGACACAGCTAATAATTTGAAAAAATCACAAAATTCAGTG
        CTATGAAGCACGG TACT    CGGA     GA                                                              
        ||||||||||||| ||||    ||||     ||                                                               
        GATACTTCGTGCC GTGA    GCCT     CC                                                              
CAAAAGTA             C    -GGA    --AAT  ACACAGGGCCACAGCCTGTGTGCAACACAGGCTGTGGCTGTGCTGTGGCTGTGAACATTAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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