SE2010337

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5539
  • Medicago truncatula
  • SE2010337
  • Tc1/Mariner
  • St1
  • MtChr4:40985654-40985800
  • N.A.
  • ACTCCCTCCGTTTCTAAATATAAGCAAATTTTACTTTTTAGATTCATTCAATTAATGATGTATGTGGTTTATAATATGGACCACATACATCATTAATTGAATGAACCTAAAGTAAAATTTGCTTATATTTAAAAACGGAGGGGAGT

Secondary structure and sequence

TSD    TIR
5'



3' 
T      -       C                      TT   A                              A
 ACTCCC TCCGTTT TAAATATAAGCAAATTTTACTT  TAG TTCATTCAATTAATGATGTATGTGGTTTAT 
 |||||| ||||||| ||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||| A
 TGAGGG AGGCAAA ATTTATATTCGTTTAAAATGAA  ATC AAGTAAGTTAATTACTACATACACCAGGTA 
       G       A                      --   C                              T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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