SE2020339

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5541
  • Medicago truncatula
  • SE2020339
  • Mutator
  • M11
  • MtChr1:20100076-20100265
  • TTAAATTTA
  • TAAATTTAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
T          -ATAT     A   A        --A          ACATTTCAAAATAA      ATTCTTTAAAAAAGTTAAATATTTTGATTTCCAAAA
 TAAATTTAGG     TGTTA CGA TGTCTCCG   CACTCTTTAA              GCAATT                                    
 ||||||||||     ||||| ||| ||||||||   ||||||||||              ||||||                                    C
 ATTTAAATTC     ACAAT GCT ACAGAGGC   GTGAGAAATT              TGGGTA                                    
           CCTTT     C   C        CTC          -------------C      TTCATTATTCATAAAAATTTTTACGTACATTAGTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3