SE2010343

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5545
  • Medicago truncatula
  • SE2010343
  • Tc1/Mariner
  • St1
  • AC233662:35364-35511
  • TA
  • TACTCCCTCTGGTCCTAAATATAAGAGAAG

Secondary structure and sequence

TSD    TIR
5'



3' 
             C  A             -AATC                    TTA          AC   A
TACTCCCTCTGGT CT AATATAAGAGAAG     TTTTTAGGTTCATTGAATAA   ATGTATTTGG  TAC 
||||||||||||| || |||||||||||||     ||||||||||||||||||||   ||||||||||  ||| A
ATGAGGGAGGCCA GA TTATATTTTCTTC     AAAAATCCAAGTAACTTATT   TACATAAATC  ATG 
             A  A             AAAAA                    TAC          AA   T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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