SE2010345

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5547
  • Medicago truncatula
  • SE2010345
  • Tc1/Mariner
  • St28
  • MtChr3:31568953-31569104
  • TA
  • TACACCCTCCGGTCACTAATATAAGCAAAAATCCATTTTTTTAGATACATTCAATTAATGATGTATGTGGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
                                C       TT                            T TTTAT
TACACCCTCCGGTCACTAATATAAGCAAAAAT CATTTTT  AGATACATTCAATTAATGATGTATGTGG C     
|||||||||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||| |      
ATGTGGGAGGCCAGTGATTATATTCGTTTTTA GTGAAAA  TTTATGTAAGTTAATTACTACATACACT G     
                                A       -T                            - TATAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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