SE2010348

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5550
  • Medicago truncatula
  • SE2010348
  • Tc1/Mariner
  • St19
  • MtChr7:22791333-22791610
  • TA
  • CCTCCGTTCCTTTTTAATTGTCATTTTTTGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TACTA    C            T          T  CATTTTACACAAA     ACAATCAATAAAT    C         --TA    ACTTCATAC      TATAATAACCTTATTCATTTAATATCTCATTTTATATATTTCTCT
     CCTC GTTCCTTTTTAA TGTCATTTTT GA             TCAAT             ATTA TACTTTTGA    CAAT         TTTTAC                                             
     |||| |||||||||||| |||||||||| ||             |||||             |||| |||||||||    ||||         ||||||                                              
     GGAG CAAGGAAAAATT ACAGTGAAAA CT             AGTTA             TGAT GTGAAAGTT    GTTA         GTTGTA                                             
ATAAA    T            C          C  CTTTTTAAAACAA     ----------AAT    A         TCAA    --------C      ATTTACAACAAAATGGTTATAATGGGAACCAATAAATAATACCTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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