SE2020354

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5556
  • Medicago truncatula
  • SE2020354
  • Mutator
  • M75
  • MtChr2:2049176-2049368
  • AATAGGAAA
  • GG

Secondary structure and sequence

TSD    TIR
5'



3' 
AATAGGAAA  AGAA     AA                T        -C   -AAAAAC   TAACTTTTTATAAAAAAATGTGTAATTATTACTTA
         GG    TGCTA  CAGTGCCCTCGGGGCA TGGTTAAG  AAC       AAG                                   
         ||    |||||  |||||||||||||||| ||||||||  |||       |||                                   A
         CC    ACGAT  GTCACGGGAGTCCCGT ACCAATTC  TTG       TCT                                   
AAAGGACAA  CAGA     TG                T        CT   ATATTTA   TTTAAACAGAACTTTTATATTCGAAACTGAAAACT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3