SE2020357

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5559
  • Medicago truncatula
  • SE2020357
  • Mutator
  • M2
  • MtChr4:18714330-18714529
  • TTTCTCGTT
  • GAGAAATGATATTTGAACAACCACTTTTAGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTCTCGTT   A          G        C       ----------------CAACTTT     CAACTCTCTCTCTCATACACTCATTATACTTTTATTTTCT
         GAG AATGATATTT AACAACCA TTTTAGA                       TGTGA                                        
         ||| |||||||||| |||||||| |||||||                       |||||                                         
         CTC TTACTATAAA TTGTTGGT AAAATTT                       AGAAG                                        
TTGCTCTTT   C          A        T       ATTAAAAATCCCTATTAGAAAAA     GAAAAATAACCTGTTATTATTATCTCTCTCTTTCCTTCTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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