SE2020377

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5579
  • Medicago truncatula
  • SE2020377
  • Mutator
  • M70
  • MtChr5:42196604-42196807
  • ATATATATA
  • ATATATATAGGTCATGTTAACTTGTGCCCTTAAGACACATGTTAA

Secondary structure and sequence

TSD    TIR
5'



3' 
          -  TC                   A  C         A     AATTCTTGACACTAATGGTAAGTATTAATTGAAAAAAATTAATATTAGAT
 ATATATATA GG  ATGTTAACTTGTGCCCTTA GA ACATGTTAA CATTA                                                  
 ||||||||| ||  ||||||||||||||||||| || ||||||||| |||||                                                   
 TATATATAT CC  TACAATTGAATACGGGAAT CT TGTACAATT CTAAA                                                  
A         A  TT                   A  A         C     ATGATCATCTTTAATACAGAGCTTTTAACGTAATTAAATAACGAGTTTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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