SE2050386

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5588
  • Medicago truncatula
  • SE2050386
  • PIF/harbinger
  • To3
  • MtChr5:5521015-5521160
  • TTA
  • AGAGTGTGTTTGGATAGGGAAATGTTTTGAGGGAATTCAACTACTTTAAGGTGAATTC

Secondary structure and sequence

TSD    TIR
5'



3' 
TT               --------------      ----                          A  G       TATT
  AGAGTGTGTTTGGAT              AGGGAA    ATGTTTTGAGGGAATTCAACTACTTT AG TGAATTC    
  |||||||||||||||              ||||||    |||||||||||||||||||||||||| || |||||||     
  TCTCACACAAACCTA              TCCCTT    TACAAAACTCCCTTAAGTTGATGAAA TC ACTTAAG    
AT               CCTCTTTACAAAAC      ACAT                          C  A       TTTG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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