SE2030387

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5589
  • Medicago truncatula
  • SE2030387
  • hAT
  • Hat9
  • MtChr2:15247405-15247579
  • GTTTAGAT
  • GTTTAGATCAATGAAGCACGGATAC

Secondary structure and sequence

TSD    TIR
5'



3' 
         A               -----------    ACAGACACATGACACGACACGGACACGGACACGCCGACACCGCTAATAATTTG
GTTTAGATC ATGAAGCACGGATAC           GGAC                                                     
||||||||| |||||||||||||||           ||||                                                      
TAGATTTGG TACTTCGTGCCTGTG           CGGC                                                     
         A               AAGAACCTAAT    ACAGGCCGTGGCCTGTGCATGTGTATATTAATGTGACTTAATACACTAAAAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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