SE2020393

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5595
  • Medicago truncatula
  • SE2020393
  • Mutator
  • M2
  • MtChr1:26559238-26559427
  • CTAAACAAG
  • AGGAGTAATGATATATGTAAATCCAATTG

Secondary structure and sequence

TSD    TIR
5'



3' 
CTAAACA     T        A    AAT   -A   ----ATAACAA    G  ------- -     TCTTTCTATTGATCAAAAATAATGGAGAGAGGA
       AGGAG AATGATAT TGTA   CCA  TTG           CTTT TT       T TTCTC                                 
       ||||| |||||||| ||||   |||  |||           |||| ||       | |||||                                  
       TCCTC TTACTATA ACAT   GGT  AAC           CCTG TT       A AGTAT                                 
GAACAAA     C        A    GTT   AA   GTTATTAAAAA    -  GAAAGAG G     GAGTGTACTGTAAGAATAGGAGAGAGAAAGAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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