SE2020399

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5601
  • Medicago truncatula
  • SE2020399
  • Mutator
  • M12
  • MtChr7:32272398-32272670
  • AGATAAACA
  • GGGTGCGGTTATGGTGCATAAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
AGATAAACA  G                    AAATC                                -   -    ACAACTCACA     --     CCACAGCAAAATGGTTTTGGCATAATTTTATACAAAACATACT
         GG TGCGGTTATGGTGCATAAGG     CTTATGCACTCTGCATAAATCCAGAAATGGTT TTG GAGT          GAAAC  CATTT                                           
         || ||||||||||||||||||||     |||||||||||||||||||||||||||||||| ||| ||||          |||||  |||||                                            
         CC ACGCCAATACCACGTATTCC     GAATACGTGGGACGTATTTAGGTCTTTACCAA GAC CTCA          CATGA  TTTTG                                           
ACAAATAGA  A                    AAAAA                                A   A    ---------A     GG     GTAATCTACATGAATTACCAAAGATCGTGGGACGTATTTAGTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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