SE2020402

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5604
  • Medicago truncatula
  • SE2020402
  • Mutator
  • M105
  • MtChr3:21734053-21734253
  • TATTTGGTA
  • TATTTGGTAGAAAATTGCTTTTTTAAC

Secondary structure and sequence

TSD    TIR
5'



3' 
    T       AA          A  ATAAAAAAC      AC  C         ATAC     TGTT   C           C     C   CTTATAA
TATT GGTAGAA  TTGCTTTTTT AC         TTCTTA  AA ACATGAAAA    TTAAA    TTC GCGGTAGTTAA TACCG CGA       
|||| |||||||  |||||||||| ||         ||||||  || |||||||||    |||||    ||| ||||||||||| ||||| |||       C
ATGG TTATCTT  AACGAAAAAA TG         AAGGAT  TT TGTACTTTT    AATTT    AAG CGCCATCAATT ATGGC GTT       
    T       CG          C  AAGGTTATA      CT  T         -ACT     -TTT   T           A     A   AAAAGAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3