SE2020404

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5606
  • Medicago truncatula
  • SE2020404
  • Mutator
  • M17
  • fpc265:70072-70272
  • TAAATACAT
  • GAGTTATGATACATAGACATCCTTAGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
 TAAATACAT   TT   A               AG  GGCA          TG      ACACAAAAATCTGACA    GCCACATGGACCCCGCACAAGCACACTTTC
          GAG  ATG TACATAGACATCCTT  GT    ATACACCCTT  ACACCC                CGTG                              
          |||  ||| |||||||||||||||  ||    ||||||||||  ||||||                ||||                               
          CTT  TAC ATGTATCTGTGGGAA  TA    TATGTGGGAA  TGTGGG                GTAT                              
TACATAAATC   -T   A               -A  AGGG          CA      ----------------    GTAATACTTCTTTCTTATCCTCTCTTTTCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3