SE2020426

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5628
  • Medicago truncatula
  • SE2020426
  • Mutator
  • M109
  • MtChr8:29308800-29308959
  • CTTCCTGTT
  • GACAATTGATTTTTGACTTTCAATACTTCCTAAAACACAAGTAAAATACTAAAATACCCTTAGTGGTA

Secondary structure and sequence

TSD    TIR
5'



3' 
CTTCCTGTT        -A        T      ACT  C  -             AT       T   CTT       ATT
         GACAATTG  TTTTTGAC TTCAAT   TC TA AAACACAAGTAAA  ACTAAAA ACC   AGTGGTA   
         ||||||||  |||||||| ||||||   || || |||||||||||||  ||||||| |||   |||||||    
         CTGTTAAC  GAAGACTG AAGTTA   AG AT TTTGTGTTCATTT  TGGTTTT TGG   TTGCCGT   
TTGCCCTTC        GA        T      CAC  A  C             AC       T   --T       CAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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