SE2050445

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5647
  • Medicago truncatula
  • SE2050445
  • PIF/harbinger
  • To15
  • MtChr3:19577273-19577418
  • TTA
  • AGAGTATGTTTGGATGGGGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT     A                      GAGGAAATGTGATGTTTTGAGGGAATTCAATTACTTTGAGGTG
  AGAGT TGTTTGGATGGGGGAATGTTTT                                           
  ||||| ||||||||||||||||||||||                                            
  TCTCA ACAAATTTACCCCCTTACAAAA                                           
AT     C                      CTCCCTTAAGTTGACAAAACTCCACTTAAGATAACAAACTTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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