SE2020460

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5662
  • Medicago truncatula
  • SE2020460
  • Mutator
  • M32
  • MtChr7:3558109-3558319
  • TAAAAACAG
  • AGGAGTAGTGATACATGTACACC

Secondary structure and sequence

TSD    TIR
5'



3' 
 TAAAAAC     T    A      T     -------C     TGGCAATACAACCCTTACACCCACACAAAATTTTGACATGTGGCAATCTAGACCCCACACAAATAG
        AGGAG AGTG TACATG ACACC        TTGTG                                                                  
        ||||| |||| |||||| |||||        |||||                                                                   
        TCCTT TTAC ATGTAC TGTGG        TATGT                                                                  
GACAAAAA     -    A      T     TAAATAAG     GGAGTAACATGTGGGATACAAAATTCCTATAAAACTATTTAAGTAGAGTGTTAGTGTGAATGAGAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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