SE2020464

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5666
  • Medicago truncatula
  • SE2020464
  • Mutator
  • M87
  • MtChr1:1169819-1170004
  • AAATAACAA
  • GGGTTTGAGTGTCTCCGGTGTACTTTTTAAGCATT

Secondary structure and sequence

TSD    TIR
5'



3' 
AAATAACAA   TTT      -CT      TA     TA      CTAAATTAAATAATCATTTCATA      TCAAAGTTTCCAATTTCCAATACACTTTA
         GGG   GAGTGT   CCGGTG  CTTTT  AGCATT                       AAATTG                             
         |||   ||||||   ||||||  |||||  ||||||                       ||||||                             T
         CCC   TTTATA   GGCCAC  GAGAA  TCGTAA                       TGAAAT                             
AACAATAAA   ---      ATT      --     CC      ---------------TCAATTCT      TTACCATTAGAAAATACATTCAAACACAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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