SE2020471

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5673
  • Medicago truncatula
  • SE2020471
  • Mutator
  • M33
  • MtChr3:37177196-37177373
  • AAAATAATA
  • GGGAAATGTCAACTTGTGCCCTTATGGCACATGTTAAGGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAATAATA   AAA   C         C    T                CCAAA   -- AAAATTATGCATCGTAATCTCATAGGATTAA
         GGG   TGT AACTTGTGC CTTA GGCACATGTTAAGGTT     GAT  G                               
         |||   ||| ||||||||| |||| ||||||||||||||||     |||  |                               A
         CCC   ACA TTGAACACG GAAT CCGTGTACAATTCCAA     AGA  T                               
ATAATAAAA   AGA   A         A    C                -----   TG ATCTCATTCATAGATAACTCTTTGTACTTTA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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