SE2020473

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5675
  • Medicago truncatula
  • SE2020473
  • Mutator
  • M18
  • MtChr6:19471918-19472124
  • TAATAATAA
  • AGAGTGATGCTAGCAACACTCTCTTTTGAACACCCTCTCTAATACTCACTCTCTTATTGGTTTAAATCATTGTGGGTCTACACTTTG

Secondary structure and sequence

TSD    TIR
5'



3' 
TAATAATA    T                TC    G     C                  C       TTT      T    G    --A       AAAA   AA
        AGAG GATGCTAGCAACACTC  TTTT AACAC CTCTCTAATACTCACTCT TTATTGG   AAATCA TGTG GTCT   CACTTTG    TTG  
        |||| ||||||||||||||||  |||| ||||| |||||||||||||||||| |||||||   |||||| |||| ||||   |||||||    |||   
        TCTC TTACGATCGTTGTGAG  AAAA TTGTG GAGAGATTGTGAGTGAGA AATAACC   TTTAGT ACAT CAGG   GTGAAAC    AAC  
TATAATAA    T                TA    G     A                  A       TAC      T    A    GTG       ---A   CC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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