SE2020477

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5679
  • Medicago truncatula
  • SE2020477
  • Mutator
  • M2
  • MtChr3:23254511-23254713
  • AAAAATGAC
  • GAGTAGTGATATTTGAACAACTATTTGATACAATTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAAATGAC   T           A          -GAT        TTTT        ---------    TTTTCTCTCTTTTCATTGGTTAAAAATAATGGAGAG
         GAG AGTGATATTTG ACAACTATTT    ACAATTTT    TGACAACT         TCTT                                    
         ||| ||||||||||| ||||||||||    ||||||||    ||||||||         ||||                                     
         CTC TTACTATAAAC TGTTGGTGAA    TGTTGAAA    ACTGTTGA         TATG                                    
CAGTAAAAA   T           A          AAAC        ---C        AAGAGAGAG    AGTGTAATATGAGAATAAGAGAGAGAAGGAAAAAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3