SE2040484

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5686
  • Medicago truncatula
  • SE2040484
  • CACTA
  • Ca1
  • MtChr3:27442865-27443030
  • AGG
  • CACTACTAAAAAAACAAAAATTAGTGAGGGAAATTTTGTGAGGGAAAACATGAAATCCCTCTCTAATTTCGTCAC

Secondary structure and sequence

TSD    TIR
5'



3' 
AGG        A     C         T          TT    G      C        C   T TA    ---C   A TAAA
   CACTACTA AAAAA AAAAATTAG GAGGGAAATT  GTGA GGAAAA ATGAAATC CTC C  ATTT    GTC C    
   |||||||| ||||| ||||||||| ||||||||||  |||| |||||| |||||||| ||| |  ||||    ||| |     
   GTGATGAT TTTTT TTTTTAATC CTCCTTTTAA  CACT CCTTTT TATTTTAG GAG G  TAAG    CAG G    
GGA        C     C         C          -T    A      T        A   T TC    AAAC   C TTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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