SE2020496

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5698
  • Medicago truncatula
  • SE2020496
  • Mutator
  • M24
  • MtChr4:39855634-39855913
  • TTTATTTTA
  • AGGGTTAATAGTGTTTTTCACTCCTGCAATATATGTCATTTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTATTTT                          C                   TTTCGCCCCTATAAAATTTTCGGTTTGATTTGCACCCTCGTAAAAATTTTATTTTCCAGAAAACACCCCTAATAGGCCATTTTCAG
        AGGGTTAATAGTGTTTTTCACTCCTG AATATATGTCATTTCCGGT                                                                                      
        |||||||||||||||||||||||||| |||||||||||||||||||                                                                                       
        TCCCAATTATCACAAAAAGTGGGGAC TTATATATGGTAAAGGCCA                                                                                      
ATTTTATT                          A                   AACTAAACGTGGGAGCATTTTAAAAATAAAAGGCCTTTTGTGGGAATTATCGGGTAAGTTTTTGGTTTTAAAGAACTTTTTTTTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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