SE2030501

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5703
  • Medicago truncatula
  • SE2030501
  • hAT
  • Hat33
  • MtChr3:11063043-11063276
  • ATTTGAAC
  • TTTGAACCAGTGGCGG

Secondary structure and sequence

TSD    TIR
5'



3' 
A      C         --A  --      TGTTACAAAGTCTTGGCAAAAAAAAATTTGCAACACATGTATAGGTGTTTACATAAGAAATTGCAAGCAAATAATCAAAAAATCTAAAG
 TTTGAA CAGTGGCGG   GC  CGGGAT                                                                                         
 |||||| |||||||||   ||  ||||||                                                                                          
 AAGTTT GTCACCGCC   GT  CGGGCT                                                                                         
C      A         AAA  GG      GCTGGGGCCCGAGGCTGGGTTTAAAAAACGTTAAAGAATACATTTAAAGAGACTTAAAGAATATATTTGGAGATATTTAACCCGTTAAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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