SE2020509

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5711
  • Medicago truncatula
  • SE2020509
  • Mutator
  • M4
  • MtChr8:7045487-7045787
  • TTAAAAATA
  • AGGGTTAATGGTGCTTTACCCCCTTGTAATATAGGTCATTTTTTATTTTCCCTCCTCTAAAATATTTTTTTTGATTTACCCCCCTGTAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAAAAAT                                           TA           C                                AAAAAATAAAA                                CGACTTTATTT
        AGGGTTAATGGTGCTTTACCCCCTTGTAATATAGGTCATTTTT  TTTTCCCTCCT TAAAATATTTTTTTTGATTTACCCCCCTGTAA           TTGGAATACCCCCCTAATAGGTCATAAAAAAA           
        |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||            
        TCCCAATTACCACGAAATGGGGGGACATTATATCCAGTAAAAA  AAAAGGGGGGA ATTTTATAAAAAAAACTAAATGGGGGGACATT           AACCTTATGGGGGGATTATCCAGTATTTTTTT           
ATAAAAAT                                           CC           C                                -AAAAAAAAAA                                AAGACTTTTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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