SE2010521

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5723
  • Medicago truncatula
  • SE2010521
  • Tc1/Mariner
  • St18
  • MtChr1:30088137-30088416
  • TA
  • TACTTCATCTGTTTCAAAATGAGTGTCACTTTAGC

Secondary structure and sequence

TSD    TIR
5'



3' 
      A                    AC      --AAAA          TTTCAAAAT AATGTCACTTTACATTTCCAATACAACTTTAATTTTTTTCTTCCAACTTTACCCTCTCAAACTTTTCTTTCACACAATTTTCAA
TACTTC TCTGTTTCAAAATGAGTGTC  TTTAGC      AAAAAAATTG         G                                                                                    
|||||| ||||||||||||||||||||  ||||||      ||||||||||         |                                                                                    T
ATGAGG AGGCAAAGTTTTACTCACAG  AAATCG      GTGTGTCTAA         T                                                                                    
      G                    CA      GTTAAC          --------- TCCTTATCTTACTTTATTAGCAATCTGTATTGTGAAAATAATTTGACGGGAACGAAATATTCTTTTTCTATTTGAATTTCAACG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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