SE2020537

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5739
  • Medicago truncatula
  • SE2020537
  • Mutator
  • M91
  • MtChr8:36286109-36286308
  • TTCTTTGAA
  • TCTTTGAAGAGAAATGATATTTGTACAATCATTTATGACAATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
T  TTT      A           T          ATG       ------TT     ACTTTATCTCTCATACTCACATTTTATTCTTACTTTCTATCTTCA
 TC   GAAGAG AATGATATTTG ACAATCATTT   ACAATTT        AGATA                                             
 ||   |||||| ||||||||||| ||||||||||   |||||||        |||||                                              
 AG   CTTCTC TTACTATAAAC TGTTGGTAAA   TGTTGAA        TGAAA                                             
A  TTT      G           T          CCA       TAAACTTT     GGAAAAGAGATAAAAGTTACCAGTTTTTGTTACCTTTCTCTTTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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