SE2020547

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_5749
  • Medicago truncatula
  • SE2020547
  • Mutator
  • M119
  • MtChr5:38365710-38365917
  • CATTAATTA
  • ATTAATTAGGGAAATGTTAACT

Secondary structure and sequence

TSD    TIR
5'



3' 
 C       A   AA         CGTGTCAT       TAAA   AGAAACTAAATGTAAAAGTTTTTTCTTGAAACTTGTGCATTCAATATCTTAAAAATTGCAAAAGT
  ATTAATT GGG  ATGTTAACT        TGGAGCA    TTA                                                                 
  ||||||| |||  |||||||||        |||||||    |||                                                                  
  TAATTAA CCC  TACAATTGA        ACACGGG    AAT                                                                 
AT       -   AG         --------       ----   TCCGATTCCCGTGTTTAATTCCTAGATTTTTACCTTTAATTTTTATTTAAAATATAATTTTATAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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